Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
HEK293, control
cell line
HEK293
chip antibody
none

Sequenced DNA Library

library_name
GSM971951: HEK293_control_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
47076220
Reads aligned (%)
78.5
Duplicates removed (%)
5.7
Number of peaks
563 (qval < 1E-05)

hg19

Number of total reads
47076220
Reads aligned (%)
78.2
Duplicates removed (%)
6.6
Number of peaks
735 (qval < 1E-05)

Base call quality data from DBCLS SRA