SRX170353
GSM971340: Bcell H3K4me1; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Blood
tissue
Blood
developmental stage
Adult
genotype/variation
wild type
cell type
Bcell
chip antibody details
Abcam, ab8895

Sequenced DNA Library

library_name
GSM971340: Bcell_H3K4me1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
13670369
Reads aligned (%)
85.7
Duplicates removed (%)
6.4
Number of peaks
9618 (qval < 1E-05)

hg19

Number of total reads
13670369
Reads aligned (%)
85.4
Duplicates removed (%)
6.6
Number of peaks
9637 (qval < 1E-05)

Base call quality data from DBCLS SRA