SRX170351
GSM971338: Bcell H3K27me1; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me1

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Blood
tissue
Blood
developmental stage
Adult
genotype/variation
wild type
cell type
Bcell
chip antibody details
Upstate, 07-448

Sequenced DNA Library

library_name
GSM971338: Bcell_H3K27me1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
14216393
Reads aligned (%)
78.7
Duplicates removed (%)
9.6
Number of peaks
120 (qval < 1E-05)

hg19

Number of total reads
14216393
Reads aligned (%)
77.9
Duplicates removed (%)
10.8
Number of peaks
174 (qval < 1E-05)

Base call quality data from DBCLS SRA