Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H2A.Z

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Blood
tissue
Blood
developmental stage
Adult
genotype/variation
wild type
cell type
Bcell
chip antibody details
Abcam, ab4174-100, lot#183790

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg38

Number of total reads
20095469
Reads aligned (%)
44.0
Duplicates removed (%)
28.9
Number of peaks
20090 (qval < 1E-05)

hg19

Number of total reads
20095469
Reads aligned (%)
43.7
Duplicates removed (%)
29.3
Number of peaks
20025 (qval < 1E-05)

Base call quality data from DBCLS SRA