SRX170348
GSM971335: CD36 Brg1; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
SMARCA4

Cell type

Cell type Class
Blood
Cell type
CD36+
NA
NA

Attributes by original data submitter

Sample

source_name
Blood
tissue
Blood
developmental stage
Adult
genotype/variation
wild type
cell type
CD36
chip antibody details
Anti-Brg1 (Khavari, P. A., et al., 1993, Nature, 366:170-174)

Sequenced DNA Library

library_name
GSM971335: CD36_Brg1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
25383486
Reads aligned (%)
95.5
Duplicates removed (%)
51.2
Number of peaks
3024 (qval < 1E-05)

hg19

Number of total reads
25383486
Reads aligned (%)
94.7
Duplicates removed (%)
52.2
Number of peaks
3021 (qval < 1E-05)

Base call quality data from DBCLS SRA