Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
mESC
strain
129/C57
antibody
none
genotype
MLL3/4 double KO

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Crosslinkedand sonicated chromatin was incubated with the ab indicated. Complex associated DNA was purified and sequenced. Libraries were constructed as per manufacturers instructions for Illumina Tru-seq.

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
5416517
Reads aligned (%)
97.0
Duplicates removed (%)
6.3
Number of peaks
22351 (qval < 1E-05)

mm9

Number of total reads
5416517
Reads aligned (%)
96.8
Duplicates removed (%)
6.6
Number of peaks
22467 (qval < 1E-05)

Base call quality data from DBCLS SRA