Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NR3C1

Cell type

Cell type Class
Lung
Cell type
A549
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

source_name
GR_ChIP_exo
cell line
A549
cell treatment
100 nM dexamethasone 1 hr
chip antibody
GR Antibody E-20 (Santa Cruz Biotechnology, sc-1003)

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
30113753
Reads aligned (%)
30.3
Duplicates removed (%)
82.8
Number of peaks
652 (qval < 1E-05)

hg38

Number of total reads
30113753
Reads aligned (%)
32.2
Duplicates removed (%)
81.9
Number of peaks
680 (qval < 1E-05)

Base call quality data from DBCLS SRA