Antigen

Antigen Class

TFs and others

Antigen

ERG

Cell type

Cell type Class

Prostate

Cell type

VCaP

Primary Tissue

Prostate

Tissue Diagnosis

Carcinoma

Sample

source_name

cell line VCaP

shRNA

PRMT5 sh1

chip antibody

ERG

treatment

DHT

cell line

VCaP

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP protocol - Purification using Magio beads Kapa HTP library preparation kit on a Sciclone NGS workstation using MagBio beads

Sequencing Platform

instrument_model

NextSeq 500

hg19

Number of total reads

26469470

Reads aligned (%)

79.2

Duplicates removed (%)

12.1

Number of peaks

6430 (qval < 1E-05)

hg38

Number of total reads

26469470

Reads aligned (%)

80.2

Duplicates removed (%)

9.8

Number of peaks

6686 (qval < 1E-05)