Antigen

Antigen Class

TFs and others

Antigen

ERG

Cell type

Cell type Class

Prostate

Cell type

VCaP

Primary Tissue

Prostate

Tissue Diagnosis

Carcinoma

Sample

source_name

cell line VCaP

shRNA

PRMT5 NTC

chip antibody

ERG

treatment

DHT

cell line

VCaP

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP protocol - Purification using Magio beads Kapa HTP library preparation kit on a Sciclone NGS workstation using MagBio beads

Sequencing Platform

instrument_model

NextSeq 500

hg38

Number of total reads

25995622

Reads aligned (%)

87.2

Duplicates removed (%)

7.9

Number of peaks

2951 (qval < 1E-05)

hg19

Number of total reads

25995622

Reads aligned (%)

86.1

Duplicates removed (%)

10.1

Number of peaks

2447 (qval < 1E-05)