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BigWig
Peak-call (q < 1E-05)
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For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For mm10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For mm9
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For mm10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For mm9
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Input control
wikigenes
PDBj
CellType: Melanoma cell lines
ATCC
MeSH
RIKEN BRC
SRX1621023
GSM2084234: EZH2 WT 480 MEL H3K27 input; Mus musculus; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Input control
Antigen
Input control
Cell type
Cell type Class
Epidermis
Cell type
Melanoma cell lines
NA
NA
Attributes by original data submitter
Sample
source_name
EZH2_WT_480_MEL_H3K27_input
strain background
C57BL/6
cell line
480
genotype/variation
wild type
tissue/cell type
Melanoma tumor cell line
cell type
Melanocyte
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
B cells were isolated from animals' spleen. Briefly, spleens were made into single cell suspension, stained with CD19-biotin, washed, stained with antibiotin magnetic beads and separated on an Automacs magnetic separator. Illumina Truseq ChIPseq kit
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
mm10
Number of total reads
25602830
Reads aligned (%)
98.4
Duplicates removed (%)
10.8
Number of peaks
446 (qval < 1E-05)
mm9
Number of total reads
25602830
Reads aligned (%)
98.2
Duplicates removed (%)
10.8
Number of peaks
493 (qval < 1E-05)
Base call quality data from
DBCLS SRA