SRX160845
GSM970259: PolII-F (HiSeq 2000); Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

source_name
Human primary fetal proerythroblasts (ProEs)
tissue
CD34+ HSPC-derived proerythroblasts
developmental stage
2-trimester fetal liver
chip antibody
PolII
vendor
Santa Cruz Biotechnology

Sequenced DNA Library

library_name
GSM970259: PolII-F (HiSeq 2000)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
147597002
Reads aligned (%)
92.5
Duplicates removed (%)
55.4
Number of peaks
31852 (qval < 1E-05)

hg19

Number of total reads
147597002
Reads aligned (%)
91.8
Duplicates removed (%)
56.0
Number of peaks
31875 (qval < 1E-05)

Base call quality data from DBCLS SRA