SRX160843
GSM970257: GATA1-F; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
GATA1

Cell type

Cell type Class
Blood
Cell type
CD34+
NA
NA

Attributes by original data submitter

Sample

source_name
Human primary fetal proerythroblasts (ProEs)
tissue
CD34+ HSPC-derived proerythroblasts
developmental stage
2-trimester fetal liver
chip antibody
GATA1
vendor
Abcam

Sequenced DNA Library

library_name
GSM970257: GATA1-F
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
117845316
Reads aligned (%)
93.2
Duplicates removed (%)
74.4
Number of peaks
13619 (qval < 1E-05)

hg19

Number of total reads
117845316
Reads aligned (%)
92.5
Duplicates removed (%)
76.0
Number of peaks
13291 (qval < 1E-05)

Base call quality data from DBCLS SRA