Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
EZH2

Cell type

Cell type Class
Digestive tract
Cell type
HCT 116
Primary Tissue
Colon
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

source_name
Colon cancer cells
cell line
HCT116
chip antibody
EZH2 (Abcam, ab3748)

Sequenced DNA Library

library_name
GSM969796: EZH2_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
23665907
Reads aligned (%)
98.3
Duplicates removed (%)
3.0
Number of peaks
862 (qval < 1E-05)

hg19

Number of total reads
23665907
Reads aligned (%)
97.4
Duplicates removed (%)
4.4
Number of peaks
1007 (qval < 1E-05)

Base call quality data from DBCLS SRA