SRX160145
GSM967309: Dp1 ChIPSeq-replicate2; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Dp1

Cell type

Cell type Class
Cell line
Cell type
S2R+
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
S2R+ cells
cell type
embryonic cells
chip antibody
rabbit anti-Dp1

Sequenced DNA Library

library_name
GSM967309: Dp1_ChIPSeq-replicate2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
18529623
Reads aligned (%)
97.6
Duplicates removed (%)
79.5
Number of peaks
4175 (qval < 1E-05)

dm6

Number of total reads
18529623
Reads aligned (%)
94.8
Duplicates removed (%)
83.2
Number of peaks
2591 (qval < 1E-05)

Base call quality data from DBCLS SRA