Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Muscle
Cell type
C2C12
Primary Tissue
Skeletal Muscle
Tissue Diagnosis
NOS

Attributes by original data submitter

Sample

source_name
C2C12 cell line
cell type
mouse myotube
chip antibody
none
cell line
C2C12

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
extract protocol was performed essentially as previously described (Creppe et al. 2014). library construction protocol was performed essentially as previously described (Creppe et al. 2014).

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
196618100
Reads aligned (%)
97.8
Duplicates removed (%)
47.6
Number of peaks
949 (qval < 1E-05)

mm9

Number of total reads
196618100
Reads aligned (%)
97.5
Duplicates removed (%)
47.5
Number of peaks
1162 (qval < 1E-05)

Base call quality data from DBCLS SRA