Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Clamp

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
CLAMP ChIP SL2 cells control RNAi
cell line
SL2

Sequenced DNA Library

library_name
GSM959265: CLAMP ChIP SL2 cells control RNAi replicate 2 Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm3

Number of total reads
22498098
Reads aligned (%)
88.2
Duplicates removed (%)
9.0
Number of peaks
3990 (qval < 1E-05)

dm6

Number of total reads
22498098
Reads aligned (%)
88.0
Duplicates removed (%)
12.1
Number of peaks
4059 (qval < 1E-05)

Base call quality data from DBCLS SRA