Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Clamp

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
CLAMP ChIP SL2 cells MSL2 RNAi
cell line
SL2

Sequenced DNA Library

library_name
GSM959262: CLAMP ChIP SL2 cells MSL2 RNAi replicate 2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm3

Number of total reads
37850575
Reads aligned (%)
67.2
Duplicates removed (%)
19.9
Number of peaks
9661 (qval < 1E-05)

dm6

Number of total reads
37850575
Reads aligned (%)
67.1
Duplicates removed (%)
22.3
Number of peaks
9290 (qval < 1E-05)

Base call quality data from DBCLS SRA