Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Clamp

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
CLAMP ChIP SL2 cells MSL2 RNAi
cell line
SL2

Sequenced DNA Library

library_name
GSM959261: CLAMP ChIP SL2 cells MSL2 RNAi replicate 2 Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm3

Number of total reads
43707761
Reads aligned (%)
76.1
Duplicates removed (%)
11.5
Number of peaks
0 (qval < 1E-05)

dm6

Number of total reads
43707761
Reads aligned (%)
75.9
Duplicates removed (%)
14.3
Number of peaks
4559 (qval < 1E-05)

Base call quality data from DBCLS SRA