Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Clamp

Cell type

Cell type Class
Cell line
Cell type
S2
Source
Oregon R
Developmental Stage
late embryonic stage

Attributes by original data submitter

Sample

source_name
CLAMP ChIP SL2 cells MSL2 RNAi
cell line
SL2

Sequenced DNA Library

library_name
GSM959259: CLAMP ChIP SL2 cells MSL2 RNAi replicate 1 Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm3

Number of total reads
69003930
Reads aligned (%)
59.8
Duplicates removed (%)
30.2
Number of peaks
0 (qval < 1E-05)

dm6

Number of total reads
69003930
Reads aligned (%)
57.4
Duplicates removed (%)
32.8
Number of peaks
35268 (qval < 1E-05)

Base call quality data from DBCLS SRA