Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Clamp

Cell type

Cell type Class
Cell line
Cell type
Kc
Source
e/se
Developmental Stage
dorsal closure stage

Attributes by original data submitter

Sample

source_name
CLAMP ChIP Kc cells control RNAi
cell line
Kc

Sequenced DNA Library

library_name
GSM959257: CLAMP ChIP Kc cells control RNAi replicate 2 Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm3

Number of total reads
26546524
Reads aligned (%)
82.5
Duplicates removed (%)
7.6
Number of peaks
2283 (qval < 1E-05)

dm6

Number of total reads
26546524
Reads aligned (%)
82.2
Duplicates removed (%)
10.6
Number of peaks
2943 (qval < 1E-05)

Base call quality data from DBCLS SRA