SRX159134
GSM959052: ChIP-seq ZNF76 FLP76 T4; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ZNF76

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
derived from HEK293, human embryonic kidney cells
cell line
FLP76
cell line specificity
HEK293-T-Rex inducible cell line expressing ZNF76
treatment
4h Induction with 1µg/mL ofdoxycycline
chip antibody
ZNF76, mouse monoclonal (Santa Cruz Biotechnology, cat. #sc-81147)

Sequenced DNA Library

library_name
GSM959052: ChIP-seq_ZNF76_FLP76_T4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
26523782
Reads aligned (%)
83.2
Duplicates removed (%)
14.0
Number of peaks
5566 (qval < 1E-05)

hg38

Number of total reads
26523782
Reads aligned (%)
84.3
Duplicates removed (%)
13.4
Number of peaks
5516 (qval < 1E-05)

Base call quality data from DBCLS SRA