SRX157968
GSM957085: E14 IgG; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
E14 ES cells
strain
129/Ola
cell type
E14 ES cells
chip antibody
Anti-IgG (IgG from rabbit serum, Sigma-Aldrich, catalog# I5006)

Sequenced DNA Library

library_name
GSM957085: E14_IgG
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
43277288
Reads aligned (%)
91.1
Duplicates removed (%)
23.9
Number of peaks
914 (qval < 1E-05)

mm9

Number of total reads
43277288
Reads aligned (%)
90.8
Duplicates removed (%)
23.9
Number of peaks
974 (qval < 1E-05)

Base call quality data from DBCLS SRA