Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
INPUT under normoxia ChIP-seq
cell type
HUVEC
chip antibody
none
passage
within 6 times

Sequenced DNA Library

library_name
GSM955979: INPUT under normoxia ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
27096731
Reads aligned (%)
98.2
Duplicates removed (%)
26.7
Number of peaks
1025 (qval < 1E-05)

hg19

Number of total reads
27096731
Reads aligned (%)
97.2
Duplicates removed (%)
28.5
Number of peaks
1219 (qval < 1E-05)

Base call quality data from DBCLS SRA