Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HIF1A

Cell type

Cell type Class
Cardiovascular
Cell type
HUVEC
Primary Tissue
Umbilical Cord
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
HIF1 under normoxia ChIP-seq
cell type
HUVEC
chip antibody
HIF1α [Novus Biologicals NB100-134 lot.K2]
passage
within 6 times

Sequenced DNA Library

library_name
GSM955977: HIF1 under normoxia ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
28582390
Reads aligned (%)
56.6
Duplicates removed (%)
34.2
Number of peaks
1306 (qval < 1E-05)

hg38

Number of total reads
28582390
Reads aligned (%)
58.8
Duplicates removed (%)
32.4
Number of peaks
1131 (qval < 1E-05)

Base call quality data from DBCLS SRA