SRX1568869
GSM2058441: ChIP-Seq input Mature B cell 14951; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mature B cell
strain
C57BL/6
genotype
Wild-type
cell preparation
Ex-vivo, MACS-sorted
cell sorting strategy
CD23 MACS-sorted
chip antibody
n.a.

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
phenol-chloroform extraction

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
60421744
Reads aligned (%)
98.5
Duplicates removed (%)
12.2
Number of peaks
523 (qval < 1E-05)

mm9

Number of total reads
60421744
Reads aligned (%)
98.3
Duplicates removed (%)
12.1
Number of peaks
598 (qval < 1E-05)

Base call quality data from DBCLS SRA