Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Tcf3

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Act B cell
strain
C57BL/6
genotype
Tcf3,4(fl/fl)
cell preparation
2-day anti-CD40 rIL-4 stimulation whole population
cell sorting strategy
whole population
chip antibody
Tcf3

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
phenol-chloroform extraction

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
38429333
Reads aligned (%)
85.7
Duplicates removed (%)
18.9
Number of peaks
13515 (qval < 1E-05)

mm9

Number of total reads
38429333
Reads aligned (%)
85.5
Duplicates removed (%)
18.9
Number of peaks
13517 (qval < 1E-05)

Base call quality data from DBCLS SRA