Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Embryo
Cell type
Embryonic brains
NA
NA

Attributes by original data submitter

Sample

strain
CD1
dev_stage
E11.5
sex
pooled male and female
tissue
cortex progenitors

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
38495502
Reads aligned (%)
40.6
Duplicates removed (%)
44.4
Number of peaks
5924 (qval < 1E-05)

mm9

Number of total reads
38495502
Reads aligned (%)
40.5
Duplicates removed (%)
44.5
Number of peaks
5839 (qval < 1E-05)

Base call quality data from DBCLS SRA