SRX155765
GSM951899: BPE HS HSF1 ChIPSeq 3; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Breast
Cell type
BPE
NA
NA

Attributes by original data submitter

Sample

source_name
BPE cells
cell type
Immortalized mammary epithelial cells
antibody
IGG (Santa Cruz, sc-2027, Lot# C2210)
tumorigenic or nontumorigenic
Non-tumorigenic

Sequenced DNA Library

library_name
GSM951899: BPE_HS_HSF1_ChIPSeq_3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
30347909
Reads aligned (%)
97.2
Duplicates removed (%)
75.9
Number of peaks
218 (qval < 1E-05)

hg19

Number of total reads
30347909
Reads aligned (%)
96.4
Duplicates removed (%)
77.7
Number of peaks
752 (qval < 1E-05)

Base call quality data from DBCLS SRA