Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HSF1

Cell type

Cell type Class
Lung
Cell type
NCI-H441
Primary Tissue
Lung
Tissue Diagnosis
Adenocarcinoma Papillary

Attributes by original data submitter

Sample

source_name
NCIH441 cells
cell type
lung cancer cell line
antibody
HSF1 (H-311, Santa Cruz, sc-9144, Lot# J0510)
tumorigenic or nontumorigenic
Tumorigenic

Sequenced DNA Library

library_name
GSM951886: NCIH441_HSF1_ChIPSeq_2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
26440273
Reads aligned (%)
26.8
Duplicates removed (%)
65.3
Number of peaks
743 (qval < 1E-05)

hg38

Number of total reads
26440273
Reads aligned (%)
28.7
Duplicates removed (%)
63.2
Number of peaks
426 (qval < 1E-05)

Base call quality data from DBCLS SRA