Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HSF1

Cell type

Cell type Class
Lung
Cell type
NCI-H441
Primary Tissue
Lung
Tissue Diagnosis
Adenocarcinoma Papillary

Attributes by original data submitter

Sample

source_name
NCIH441 cells
cell type
lung cancer cell line
antibody
HSF1 (H-311, Santa Cruz, sc-9144, Lot# J0510)
tumorigenic or nontumorigenic
Tumorigenic

Sequenced DNA Library

library_name
GSM951885: NCIH441_HSF1_ChIPSeq_1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg19

Number of total reads
10838885
Reads aligned (%)
70.5
Duplicates removed (%)
6.2
Number of peaks
555 (qval < 1E-05)

hg38

Number of total reads
10838885
Reads aligned (%)
72.3
Duplicates removed (%)
4.8
Number of peaks
421 (qval < 1E-05)

Base call quality data from DBCLS SRA