SRX155735
GSM951869: NCI1703 IGG ChIPSeq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
NCI-H1703
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma Non-Small Cell

Attributes by original data submitter

Sample

source_name
NCI1703 cells
cell type
lung cancer cell line
antibody
IGG (Santa Cruz, sc-2027, Lot# C2210)
tumorigenic or nontumorigenic
Tumorigenic

Sequenced DNA Library

library_name
GSM951869: NCI1703_IGG_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
30762844
Reads aligned (%)
94.7
Duplicates removed (%)
9.9
Number of peaks
737 (qval < 1E-05)

hg19

Number of total reads
30762844
Reads aligned (%)
93.9
Duplicates removed (%)
11.5
Number of peaks
1004 (qval < 1E-05)

Base call quality data from DBCLS SRA