Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
HSF1

Cell type

Cell type Class
Breast
Cell type
BPLER
NA
NA

Attributes by original data submitter

Sample

source_name
BPLER cells
cell type
Transformed mammary epithelial cells
antibody
HSF1 (H-311, Santa Cruz, sc-9144, Lot# J0510)
tumorigenic or nontumorigenic
Tumorigenic

Sequenced DNA Library

library_name
GSM951859: BPLER_HSF1_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
14612556
Reads aligned (%)
53.1
Duplicates removed (%)
42.1
Number of peaks
540 (qval < 1E-05)

hg38

Number of total reads
14612556
Reads aligned (%)
54.7
Duplicates removed (%)
40.9
Number of peaks
470 (qval < 1E-05)

Base call quality data from DBCLS SRA