SRX155529
GSM950851: EmptyVector H3K27me3 ChIPSeq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
UKE-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

source_name
UKE-1
cell type
Leukemia cell line
cell line
UKE-1
variation
EmptyVector
antibody
H3K27me3 Milipore Cat# 7449 Lot # DAM151401

Sequenced DNA Library

library_name
GSM950851: EmptyVector_H3K27me3_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
37683502
Reads aligned (%)
95.4
Duplicates removed (%)
17.8
Number of peaks
2143 (qval < 1E-05)

hg19

Number of total reads
37683502
Reads aligned (%)
93.5
Duplicates removed (%)
22.7
Number of peaks
1764 (qval < 1E-05)

Base call quality data from DBCLS SRA