Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
UKE-1
Primary Tissue
Blood
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

source_name
UKE-1
cell type
Leukemia cell line
cell line
UKE-1
variation
EmptyVector
antibody
H3K4me3 Milipore Cat# 07-473 Lot# R0903B0054

Sequenced DNA Library

library_name
GSM950850: EmptyVector_H3K4me3_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg38

Number of total reads
38496996
Reads aligned (%)
94.3
Duplicates removed (%)
17.1
Number of peaks
55096 (qval < 1E-05)

hg19

Number of total reads
38496996
Reads aligned (%)
93.8
Duplicates removed (%)
17.8
Number of peaks
56113 (qval < 1E-05)

Base call quality data from DBCLS SRA