Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Tot2
NA
NA

Attributes by original data submitter

Sample

source_name
Tot2 cells, MSCV-IRF8 transuced, Day3
cell line
Myeloid progenitor cell line Tot2 (derived from Irf8 knockout mouse)
culture condition
MSCV-IRF8 transduced
treatment period
3 days
chip antibody
none

Sequenced DNA Library

library_name
GSM950323: Tot2, MSCV-IRF8, Day3, input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
51256306
Reads aligned (%)
81.4
Duplicates removed (%)
33.6
Number of peaks
476 (qval < 1E-05)

mm9

Number of total reads
51256306
Reads aligned (%)
81.2
Duplicates removed (%)
33.6
Number of peaks
603 (qval < 1E-05)

Base call quality data from DBCLS SRA