SRX153080
GSM945573: Input Raji WT; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
RAJI
Primary Tissue
Blood
Tissue Diagnosis
Malignant Lymphoma - Burkitts Type

Attributes by original data submitter

Sample

source_name
Human Raji WT
tissue
Burkitt's lymphoma
passages
N.D.
cell line
Raji

Sequenced DNA Library

library_name
GSM945573: Input Raji WT
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
84710835
Reads aligned (%)
86.7
Duplicates removed (%)
36.0
Number of peaks
1368 (qval < 1E-05)

hg19

Number of total reads
84710835
Reads aligned (%)
85.9
Duplicates removed (%)
37.1
Number of peaks
1765 (qval < 1E-05)

Base call quality data from DBCLS SRA