SRX153076
GSM945569: Input mouse ES; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Mouse ES-cells
cell type
ES
passages
>10
strain
C57BL/6
developmental stage
N.D.
antibody
none

Sequenced DNA Library

library_name
GSM945569: Input mouse ES
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
58210398
Reads aligned (%)
97.9
Duplicates removed (%)
23.5
Number of peaks
808 (qval < 1E-05)

mm9

Number of total reads
58210398
Reads aligned (%)
97.6
Duplicates removed (%)
23.5
Number of peaks
923 (qval < 1E-05)

Base call quality data from DBCLS SRA