Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Common myeloid progenitor
NA
NA

Attributes by original data submitter

Sample

source_name
myeloid leukemia
cell type
Bone marrow leukemic blasts sorted from moribund mice that had been transplanted with CMP-cells transformed with MN1
genotype
Genotype: Dot1l f/f (conditional allele, NOT inactivated)
strain
C57BL/6
chip-antibody
N/A (input)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
DNA was isolated using standard ChIP protocol Nugen Ovation Ultra low system V2

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
92470253
Reads aligned (%)
98.8
Duplicates removed (%)
45.3
Number of peaks
670 (qval < 1E-05)

mm9

Number of total reads
92470253
Reads aligned (%)
98.5
Duplicates removed (%)
45.4
Number of peaks
711 (qval < 1E-05)

Base call quality data from DBCLS SRA