Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K79me2

Cell type

Cell type Class
Blood
Cell type
Common myeloid progenitor
NA
NA

Attributes by original data submitter

Sample

source_name
myeloid leukemia
cell type
Bone marrow leukemic blasts sorted from moribund mice that had been transplanted with CMP-cells transformed with MN1
genotype
Genotype: Dot1l f/f (conditional allele, NOT inactivated)
strain
C57BL/6
chip-antibody
Abcam anti-H3K79me2 (ab3594)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
DNA was isolated using standard ChIP protocol Nugen Ovation Ultra low system V2

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
33621887
Reads aligned (%)
99.0
Duplicates removed (%)
17.5
Number of peaks
6755 (qval < 1E-05)

mm9

Number of total reads
33621887
Reads aligned (%)
98.9
Duplicates removed (%)
17.6
Number of peaks
6757 (qval < 1E-05)

Base call quality data from DBCLS SRA