Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K79me2

Cell type

Cell type Class
Blood
Cell type
MUTZ-3
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Myelogenous

Attributes by original data submitter

Sample

source_name
Mutz3_EPZ00477
cell line
Mutz3
cell type
human myeloid leukemia cell line with high MN1 expression
genotype
non-MLL-rearranged
chip-antibody
Abcam anti-H3K79me2 (ab3594)

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
DNA was isolated using standard ChIP protocol Nugen Ovation Ultra low system V2

Sequencing Platform

instrument_model
Illumina HiSeq 2000

hg38

Number of total reads
50369308
Reads aligned (%)
99.0
Duplicates removed (%)
2.5
Number of peaks
1162 (qval < 1E-05)

hg19

Number of total reads
50369308
Reads aligned (%)
98.2
Duplicates removed (%)
3.9
Number of peaks
1244 (qval < 1E-05)

Base call quality data from DBCLS SRA