SRX152100
GSM945892: GAF wing disc ChIP, replicate2; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Trl

Cell type

Cell type Class
Larvae
Cell type
Imaginal wing disc
NA
NA

Attributes by original data submitter

Sample

source_name
Wing imaginal disc ChIP; Iso1 strain; GAF antibody
strain
Iso1
developmental stage
L3
tissue
Wing imaginal disc
antibody
anti-Trl (antii-GAF)

Sequenced DNA Library

library_name
GSM945892: GAF wing disc ChIP, replicate2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
20241401
Reads aligned (%)
40.3
Duplicates removed (%)
39.1
Number of peaks
8265 (qval < 1E-05)

dm6

Number of total reads
20241401
Reads aligned (%)
32.3
Duplicates removed (%)
50.4
Number of peaks
5300 (qval < 1E-05)

Base call quality data from DBCLS SRA