Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
yki

Cell type

Cell type Class
Embryo
Cell type
8-16h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
8-16hr embryo ChIP; Iso1 strain; Yki antibody
strain
Iso1
developmental stage
Embryo, 8-16hr
tissue
Whole embryo
antibody
anti-Yki

Sequenced DNA Library

library_name
GSM945885: Yki embryo ChIP, replicate1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm3

Number of total reads
72611177
Reads aligned (%)
58.9
Duplicates removed (%)
39.5
Number of peaks
0 (qval < 1E-05)

dm6

Number of total reads
72611177
Reads aligned (%)
55.2
Duplicates removed (%)
43.0
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA