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For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: Trl
wikigenes
PDBj
CellType: 8-16h embryos
ATCC
MeSH
RIKEN BRC
SRX152090
GSM945882: GAF embryo ChIP, replicate1; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
Trl
Cell type
Cell type Class
Embryo
Cell type
8-16h embryos
NA
NA
Attributes by original data submitter
Sample
source_name
8-16hr embryo ChIP; Iso1 strain; GAF antibody
strain
Iso1
developmental stage
Embryo, 8-16hr
tissue
Whole embryo
antibody
anti-Trl (antii-GAF)
Sequenced DNA Library
library_name
GSM945882: GAF embryo ChIP, replicate1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
37981047
Reads aligned (%)
93.9
Duplicates removed (%)
70.3
Number of peaks
9242 (qval < 1E-05)
dm3
Number of total reads
37981047
Reads aligned (%)
95.3
Duplicates removed (%)
67.4
Number of peaks
9114 (qval < 1E-05)
Base call quality data from
DBCLS SRA