SRX151960
GSM945561: Cl8-PolII ChipSeq Input extraction1 seq1 aliquote 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Larvae
Cell type
Dorsal mesothoracic disc
NA
NA

Attributes by original data submitter

Sample

source_name
Cl8-PolII_ChipSeq_Input
cell line
CME-W1-Cl.8+
tissue
dorsal mesothoracic disc
developmental stage
third instar larval stage
Sex
male

Sequenced DNA Library

library_name
GSM945561: Cl8-PolII_ChipSeq_Input extraction1_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
6073606
Reads aligned (%)
94.2
Duplicates removed (%)
13.5
Number of peaks
5824 (qval < 1E-05)

dm3

Number of total reads
6073606
Reads aligned (%)
94.6
Duplicates removed (%)
11.1
Number of peaks
7142 (qval < 1E-05)

Base call quality data from DBCLS SRA