SRX151959
GSM945560: Cl8-ORC ChIP-Seq IP4 extraction4 seq1 aliquote 1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Orc2

Cell type

Cell type Class
Larvae
Cell type
Dorsal mesothoracic disc
NA
NA

Attributes by original data submitter

Sample

source_name
Cl8-ORC_ChIP-Seq_IP4
cell line
CME-W1-Cl.8+
tissue
dorsal mesothoracic disc
developmental stage
third instar larval stage
Sex
male

Sequenced DNA Library

library_name
GSM945560: Cl8-ORC_ChIP-Seq_IP4 extraction4_seq1 aliquote 1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
5120395
Reads aligned (%)
90.1
Duplicates removed (%)
6.0
Number of peaks
6245 (qval < 1E-05)

dm6

Number of total reads
5120395
Reads aligned (%)
87.4
Duplicates removed (%)
8.4
Number of peaks
6090 (qval < 1E-05)

Base call quality data from DBCLS SRA