SRX151947
GSM945606: Blood Donor No.1 non-stimulated PBMCs STAT4 ChIP-Seq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
STAT4

Cell type

Cell type Class
Blood
Cell type
PBMC
Tissue
blood
Lineage
mesoderm
Description
peripheral blood mononuclear cells

Attributes by original data submitter

Sample

source_name
non-stimulated PBMCs_STAT4 ChIP-Seq
cell type
peripheral blood mononuclear cells (PBMCs)
chip antibody
STAT4
chip antibody vendor
Santa Cruz Biotechnology

Sequenced DNA Library

library_name
GSM945606: Blood Donor No.1_non-stimulated PBMCs_STAT4 ChIP-Seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
28385031
Reads aligned (%)
88.5
Duplicates removed (%)
65.9
Number of peaks
1021 (qval < 1E-05)

hg19

Number of total reads
28385031
Reads aligned (%)
87.3
Duplicates removed (%)
68.4
Number of peaks
741 (qval < 1E-05)

Base call quality data from DBCLS SRA