Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
NIPBL

Cell type

Cell type Class
Blood
Cell type
Lymphoblastoid cells
NA
NA

Attributes by original data submitter

Sample

source_name
Lymphoblastoid cells
chip antibody
Nipbl
antibody catalog number
Bethyl A301-779A
cell type
HLS554P

Sequenced DNA Library

library_name
GSM941219: ChIP-Seq for Nipbl in hLCL
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
24943933
Reads aligned (%)
58.1
Duplicates removed (%)
21.0
Number of peaks
8038 (qval < 1E-05)

hg38

Number of total reads
24943933
Reads aligned (%)
60.7
Duplicates removed (%)
28.1
Number of peaks
7813 (qval < 1E-05)

Base call quality data from DBCLS SRA