SRX151228
GSM941217: Seq WCE for hLCL; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Lymphoblastoid cells
NA
NA

Attributes by original data submitter

Sample

source_name
Lymphoblastoid cells
chip antibody
None
antibody catalog number
None WCE
cell type
HLS554P

Sequenced DNA Library

library_name
GSM941217: Seq WCE for hLCL
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
27443346
Reads aligned (%)
89.0
Duplicates removed (%)
12.7
Number of peaks
624 (qval < 1E-05)

hg19

Number of total reads
27443346
Reads aligned (%)
84.1
Duplicates removed (%)
10.4
Number of peaks
967 (qval < 1E-05)

Base call quality data from DBCLS SRA