SRX151225
GSM941546: input H3K79me2 ChIPSeq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
RS4-11
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
Acute lymphoblastic leukemia cells with MLL/AF4 translocation, input
cell type
RS4;11 ALL cells
chip antibody
none

Sequenced DNA Library

library_name
GSM941546: input_H3K79me2_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
34334454
Reads aligned (%)
97.6
Duplicates removed (%)
32.9
Number of peaks
1034 (qval < 1E-05)

hg19

Number of total reads
34334454
Reads aligned (%)
96.8
Duplicates removed (%)
33.9
Number of peaks
1163 (qval < 1E-05)

Base call quality data from DBCLS SRA