SRX151222
GSM941543: MLLN ChIPSeq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
KMT2A

Cell type

Cell type Class
Blood
Cell type
RS4-11
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
Acute lymphoblastic leukemia cells with MLL/AF4 translocation, MLLN ChIP
cell type
RS4;11 ALL cells
chip antibody
MLLN
chip antibody host
rabbit
antibody vendor
Bethyl Laboratories

Sequenced DNA Library

library_name
GSM941543: MLLN_ChIPSeq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
29211478
Reads aligned (%)
45.7
Duplicates removed (%)
44.1
Number of peaks
2063 (qval < 1E-05)

hg38

Number of total reads
29211478
Reads aligned (%)
46.7
Duplicates removed (%)
43.2
Number of peaks
2068 (qval < 1E-05)

Base call quality data from DBCLS SRA